UROP Research Mentor Project Submission Portal: Submission #605 | Center for Undergraduate Research and Academic Engagement

Submission information

Submission Number: 605

Submission ID: 9301

Submission UUID: b6f1fa6f-5654-4958-bf7f-191525d26ad6

Submission URI: /urop-research-mentor-project-submission-portal

Submission Update: /urop-research-mentor-project-submission-portal?token=x8UxVZ4hSbT3VKtRQ_aH3MLk-ps6UEWhEWZGR_-A-Ms

Created: Fri, 08/25/2023 - 09:41 PM

Completed: Fri, 08/25/2023 - 09:41 PM

Changed: Tue, 08/29/2023 - 03:44 PM

Remote IP address: 96.255.35.246

Submitted by: Anonymous

Language: English

Is draft: No

Webform: UROP Project Proposal Portal

Submitted to: UROP Research Mentor Project Submission Portal

Research Mentor Information

Primary Research Mentor Name Marcos Muller Vasconcelos

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Contact Email (FSU Email if affiliated) m.vasconcelos@fsu.edu

Position Title Faculty

FSU College (if applicable) FAMU-FSU College of Engineering

FSU Department or Non-FSU Organization Affiliation Electrical and Computer Engineering

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Additional Research Mentor(s)

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Overall Project Details

Title of the Project Novel models and simulation of bacterial networks and their collective behavior

Project Keywords Quorum sensing, bacterial colonies, systems biology, networks, decision-making, game theory

Are you currently looking for research assistants? Yes

Number of Research Assistants Needed 2

Relevant Research Assistant Major(s) Open to all majors

Project Location: FAMU-FSU College of Engineering

If the project location is off campus, does the research assistant(s) need to provide their own transportation? Yes

Please select the choice that most accurately describes your expectations for the research assistant(s): Partially Remote

Approximately how many hours a week would the research assistant(s) need to work? 10 hours/week

Roughly what time frame do you expect research assistant(s) to work? Flexible schedule (Combination of business and outside of business. TBD between student and research mentor.)

Overall Research Project Description Bacteria are among the simplest life forms on Earth. Each bacterial cell possesses minimal sensing and actuation capabilities. Nevertheless, they can perform incredibly complex tasks as if operating in unison, akin to the formation of multicellular organisms. Behind this intriguing phenomenon lies a mechanism known as Quorum Sensing. In this project, students will delve into understanding how Quorum Sensing operates, learn the art of mathematically modeling it, and engage in computer simulations. Additionally, they will gain proficiency in using Cello, a programming language designed for creating computational circuits within living cells.

Research Tasks Literature review
Learn mathematical modeling of inter and intra species bacterial quorum sensing
Perform Matlab and/or Python simulations
Learn how to use the language Cello to design DNA code for decision-making bacteria

Skills that research assistant(s) may need: Knowledge of Matlab or equivalent (recommended, but not required)
Interest in synthetic biology (strongly recommended)

Mentoring Philosophy My mentoring philosophy is based on helping students gain confidence in their ideas and developing their creativity. I strongly believe that there is no limit to what the human mind can accomplish, and that the world of ideas has an infinite number of 'low hanging fruits'; we just need to learn how to look at problems from different angles. I am committed to sharing my experience and providing a safe and nurturing environment for students who have a genuine interest in science and a passion for developing new ideas.

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UROP Program Elements

Mentor Handbook, FAQs, and Communication Yes

UROP Performance Evaluation Yes

Materials Grant Yes

UROP Poster Presentation Yes

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Year 2023

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